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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015934842.1_cds_XP_016480842.1_72241
CDS Infomation

[gene=LOC107801938] [db_xref=GeneID:107801938] [protein=mitochondrial-processing peptidase subunit alpha-like] [partial=5'] [protein_id=XP_016480842.1] [location=join(<2163..2399,2508..2804,2887..3054,3164..3331,3638..3718,4544..4610,6154..6251,7670..7742,7947..8017,8118..8167,8900..9012,9304..9356)] [gbkey=CDS]
Sequence

GCACGTCAAGTCAACAGGGTCTTGACAAGATTTTCAAGTTCAACTGCTGTTGCAACCAAG
CCATCTGGGGGCATTTTTAGTTGGCTAACCGGTGAAAAGTCGAGTCAACAGCCTCCCTTG
GACTTCCCCCTTAATGATGTTAAACTCTCACCACCATTACCTGATTATGTTGAACCTGGA
AAGACCCAGATAACAACTCTCGCCAATGGTCTCAAAGTGGCCTCTGAAACATCAGTGAAC
CCTGCTGCCTCAATCGGCCTATATGTTGACTGTGGCTCTATTTACGAGACACCAGCTTCA
TATGGAGCGACACACCTCTTGGAACGCATGGCCTTCAAAAGCACATTAAACCGGAGCCAC
TTGCGTATTGTACGAGAAATTGAAGCAATTGGTGGTAATGTAACAGCTTCAGCCTCACGA
GAGCATATGATCTACACTTATGATGCTTTGAAAACTTATGTACCACAAATGGTGGAGATG
CTTGTTGACTGTGTTAGAAATCCTGCATTCCTGGATTGGGAAGTTACTGAACAGCTTGAG
AAGGTTAAAGCTGAGATTAGTGAGTACTCCAAAAACCCTCAGCACTTGCTTTTGGAGGCA
GTTCATTCTGCTGGTTACGCTGGTCCATATGGGAATTCTCTAATGGCCACAGAAGCTACA
GTAAACAGGTTGAATAGCACAGTGCTGGAACAGTTTGTAGCTGAGAATTATACTGCTCCT
CGGATGGTTCTTGCTGCATCTGGTGTTGAACATGGAGAATTGTTAAAAATTGCAGAACCT
CTTCTGTCTGATTTACCTAAGGTGGCTGTTTCTGAGGTGCCGAAACCTGTGTATGTCGGA
GGAGATTACCGCCGTCAAGCTGATGCAGAGATGACCCATTTTGCCCTTGCTTTTGAAGTT
CCTGGTGGCTGGATGTCTGAAAAGGAATCAATGACTTTAACAGTTCTTCAGATGCTTATG
GGAGGAGGTGGATCTTTCTCAGCTGGAGGTCCTGGAAAAGGGATGTACTCAAGATTATAT
CTTCGTGTCTTGAATCAGTACCCTCAGATTCAAGCATTCTCTGCATTCAGCAGCATTTAT
AATGACACCGGATTATTTGGAATTCAAGCAACTACGACCTCTGATTTTGGGCCACAAGCT
GTTGATGTGGCAGTTAAGGAGCTTGTTGCAATAGCCAACCCTGGAGAAGTTGACCAGGTA
CAGCTAGACCGTGCTAAACAGTCAACAAAATCTGCCATTCTTATGAACTTGGAATCTCGG
ATGGTTGCATCAGAAGATATTGGCAGACAACTTTTGACATATGGAGAGAGGAAACCAGTG
GAGCATTTCTTGAAAGCTATTGATGCAATTTCAGCAAAAGATATTGCTTCCGTTGCACAT
AAGCTAATTTCGTCGCCTCTGACCATGGCATCTTATGGAGATGTTCTTTCCCTCCCGAGT
TATGATGCAGTCAGCAGCAGGTTCCATTCCAAATAA

Peptide Sequence

PEP ID

XP_016480842.1
PEP Infomation

PREDICTED: mitochondrial-processing peptidase subunit alpha-like, partial [Nicotiana tabacum]
Sequence

ARQVNRVLTRFSSSTAVATKPSGGIFSWLTGEKSSQQPPLDFPLNDVKLSPPLPDYVEPG
KTQITTLANGLKVASETSVNPAASIGLYVDCGSIYETPASYGATHLLERMAFKSTLNRSH
LRIVREIEAIGGNVTASASREHMIYTYDALKTYVPQMVEMLVDCVRNPAFLDWEVTEQLE
KVKAEISEYSKNPQHLLLEAVHSAGYAGPYGNSLMATEATVNRLNSTVLEQFVAENYTAP
RMVLAASGVEHGELLKIAEPLLSDLPKVAVSEVPKPVYVGGDYRRQADAEMTHFALAFEV
PGGWMSEKESMTLTVLQMLMGGGGSFSAGGPGKGMYSRLYLRVLNQYPQIQAFSAFSSIY
NDTGLFGIQATTTSDFGPQAVDVAVKELVAIANPGEVDQVQLDRAKQSTKSAILMNLESR
MVASEDIGRQLLTYGERKPVEHFLKAIDAISAKDIASVAHKLISSPLTMASYGDVLSLPS
YDAVSSRFHSK

Transcript Sequence

Gene sequence data has not been registered.